Greydon Gilmore

Greydon Gilmore

Ph.D. Candidate in Biomedical Engineering

Western University

About

Greydon Gilmore is a current Ph.D. candidate in Biomedical Engineering in the lab of Dr. Mandar Jog and Dr. Rajni Patel. His research interests include deep brain stimulation and localization techniques for electrodes post-operation. He has several industry partnered grants focused on improving precision and outcome of deep brain stimulation surgery for movement disorders.

Interests
  • Deep brain stimulation
  • Machine learning
  • Signal processing
Education

  • Ph.D. Biomedical Engineering, 2021

    Western University

  • M.Sc. Neuroscience, 2015

    Western University

  • B.Sc. Neuroscience, 2013

    Carleton University

Skills

Programming

Python, Matlab, Bash, R, git

Neuroimaging software

FSL, ANTS, 3D Slicer, BrainVoyager

Recent Publications

Dinkar Kulshreshtha, Marcus Pieterman, Greydon Gilmore, Mandar Jog (2022). Optimizing the selection of Parkinson’s disease patients for neuromodulation using the levodopa challenge test. In Journal of Neurology.

PDF Cite Source Document DOI

Mohamad Abbass, Greydon Gilmore, Alaa Taha, Ryan Chevalier, Magdalena Jach, Terry M Peters, Ali R Khan, Jonathan C Lau (2022). Application of the anatomical fiducials framework to a clinical dataset of patients with Parkinson’s disease. In Brain Structure and Function.

PDF Cite Source Document DOI

Thibault Martin, Greydon Gilmore, Claire Haegelen, Pierre Jannin, John SH Baxter (2021). Adapting the listening time for micro-electrode recordings in deep brain stimulation interventions. In International Journal of Computer Assisted Radiology and Surgery.

PDF Cite Source Document DOI

Thibault Martin, Maxime Peralta, Greydon Gilmore, Paul Sauleau, Claire Haegelen, Pierre Jannin, John SH Baxter (2021). Extending convolutional neural networks for localizing the subthalamic nucleus from microelectrode recordings in Parkinson’s disease. In Biomedical Signal Processing and Control.

PDF Cite Source Document DOI

Igor Varga, Eduard Bakstein, Greydon Gilmore, Daniel Novak (2020). Image-Based Subthalamic Nucleus Segmentation for Deep Brain Surgery with Electrophysiology Aided Refinement. In International Workshop on Multimodal Learning for Clinical Decision Support.

PDF Cite Source Document DOI

See all publications

Grants

Graduate Student Award

  • Year: 2020-2022
  • Granting Agency: Parkinson’s Society of Canada
  • Amount: $20,000 CAD

Intern Talentedge Program

  • Year: 2017-2019
  • Granting Agency: OCE Talent Edge Internship Program
  • Amount: $60,000 CAD

Graduate Student Award

  • Year: 2017-2019
  • Granting Agency: Parkinson’s Society of Canada
  • Amount: $40,000 CAD

Graduate Student Innovation Scholars

  • Year: 2017
  • Granting Agency: WORLDDiscoveries – Western University
  • Amount: $1,500 CAD

Canadian Graduate Scholarship

  • Year: 2014-2016
  • Granting Agency: Canadian Institute of Health Research
  • Amount: $37,000 CAD

Training

Neurohackademy

  • Year: 2019
  • Institute: University of Washington
  • Website

Deep Learning Reinforcement Learning Summer School

  • Year: 2018
  • Institute: Vector Institute and CIFAR
  • Website

Intraoperative Neurophysiological Monitoring Course

  • Year: 2017
  • Institute: Greenville Neuromodulation Centre
  • Website

Recent Posts

Making PDFs Searchable
I make use of the advanced search feature in Zotereo frequently, which enables searching through manuscript PDFs. However, when you obtain manuscript PDF files from online databases, they may not be in a searchable format.
Greydon Gilmore
Last updated on Feb 1, 2022
Freesurfer Installation
Download software Download the linux software version. Run the following command: sudo tar -C /usr/local -xzvf /mnt/c/Users/*[your_username]*/Downloads/freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz You will also need to install some dependancies: sudo apt-get install tcsh sudo apt-get install libglu1 sudo apt-get install libxss1 Post-Install Configurations Add Freesurfer to your path:
Greydon Gilmore
Last updated on Feb 1, 2022
Adding application launch icon to favorites
Download your own icon image Find path to the executable of your application by running (replace brackets with name of applicaion): which [name_application] Copy the path from this output.
Greydon Gilmore
Last updated on Feb 1, 2022
Install Advanced Normalization Tools
Get the latest ANTs code Download the latest code into an arbitrary directory, I use ~/code: mkdir ~/code cd ~/code git clone https://github.com/ANTsX/ANTs.git You will also need to install the ZLIB libraries:
Greydon Gilmore
Last updated on Feb 1, 2022
SSHFS Desktop Application
Setup fuse Run the following in a terminal: modprobe fuse Create a FUSE usergroup and add yourself to the group sudo groupadd fuse sudo usermod -a -G fuse $USER Create a set of ssh-keys, press enter when asked to name the file (blank) and press enter when asked to enter a passphrase (blank):
Greydon Gilmore
Last updated on Feb 1, 2022
See all posts

Contact